The data presented is associated with the following publication:

Nehar-Belaid et al., Nature Immunology, 2020. PMID: 32747814

Experimental design/Pipeline:



This study is a collaboration of the following groups:



This study was funded and supported by:



Source Code/Questions?







UMAP plots across, groups, SLEDAI categories, 10X_runs, or samples







Subcluster cell frequency across, groups, SLEDAI categories, 10X_runs, or samples






Gene expression analysis across Subclusters





DEGs on selected cells


Step 1: select cells 1

Step 2: select cells 2

Step 3: Run Differentially Expressed Genes (DEG)


Differentially Expressed Genes

DEGs in a SC vs. the rest of the cells






DEGs in a Subcluster (SC) as compared to another